Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0229 | CHISP_1846 | Beta-lysine acetyltransferase. | N-terminal acetyltransferase. | 0.562 |
CHISP_0229 | CHISP_1847 | Beta-lysine acetyltransferase. | Peptidase M20. | 0.608 |
CHISP_0229 | CHISP_2097 | Beta-lysine acetyltransferase. | N-acetylglutamate synthase. | 0.567 |
CHISP_0229 | CHISP_2514 | Beta-lysine acetyltransferase. | Cupin. | 0.435 |
CHISP_0979 | CHISP_1846 | Aspartate aminotransferase. | N-terminal acetyltransferase. | 0.503 |
CHISP_0979 | CHISP_1847 | Aspartate aminotransferase. | Peptidase M20. | 0.533 |
CHISP_0979 | CHISP_1900 | Aspartate aminotransferase. | Shikimate kinase I. | 0.610 |
CHISP_0979 | CHISP_2097 | Aspartate aminotransferase. | N-acetylglutamate synthase. | 0.723 |
CHISP_0979 | CHISP_2772 | Aspartate aminotransferase. | Ornithine decarboxylase. | 0.567 |
CHISP_0979 | CHISP_2902 | Aspartate aminotransferase. | Diaminopimelate decarboxylase. | 0.567 |
CHISP_0979 | CHISP_3228 | Aspartate aminotransferase. | Diaminopimelate decarboxylase. | 0.651 |
CHISP_1846 | CHISP_0229 | N-terminal acetyltransferase. | Beta-lysine acetyltransferase. | 0.562 |
CHISP_1846 | CHISP_0979 | N-terminal acetyltransferase. | Aspartate aminotransferase. | 0.503 |
CHISP_1846 | CHISP_1847 | N-terminal acetyltransferase. | Peptidase M20. | 0.968 |
CHISP_1846 | CHISP_1900 | N-terminal acetyltransferase. | Shikimate kinase I. | 0.622 |
CHISP_1846 | CHISP_2097 | N-terminal acetyltransferase. | N-acetylglutamate synthase. | 0.646 |
CHISP_1846 | CHISP_2514 | N-terminal acetyltransferase. | Cupin. | 0.497 |
CHISP_1846 | CHISP_2772 | N-terminal acetyltransferase. | Ornithine decarboxylase. | 0.482 |
CHISP_1846 | CHISP_2902 | N-terminal acetyltransferase. | Diaminopimelate decarboxylase. | 0.482 |
CHISP_1846 | CHISP_2921 | N-terminal acetyltransferase. | L,L-diaminopimelate aminotransferase. | 0.492 |
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