Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0248 | CHISP_1324 | GTP-binding protein EngB. | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 0.890 |
CHISP_0248 | CHISP_1385 | GTP-binding protein EngB. | 50S ribosomal protein L13p (L13Ae). | 0.824 |
CHISP_0248 | CHISP_1622 | GTP-binding protein EngB. | 50S ribosomal protein L11p (L12e). | 0.812 |
CHISP_0248 | CHISP_1632 | GTP-binding protein EngB. | 50S ribosomal protein L3p (L3e). | 0.831 |
CHISP_0248 | CHISP_1643 | GTP-binding protein EngB. | 50S ribosomal protein L24p (L26e). | 0.856 |
CHISP_0248 | CHISP_1651 | GTP-binding protein EngB. | 50S ribosomal protein L15p (L27Ae). | 0.854 |
CHISP_0248 | CHISP_1658 | GTP-binding protein EngB. | 50S ribosomal protein L17p. | 0.852 |
CHISP_0248 | CHISP_1877 | GTP-binding protein EngB. | RNA methyltransferase, TrmH family. | 0.796 |
CHISP_0248 | CHISP_2251 | GTP-binding protein EngB. | Iojap-like ribosome-associated protein. | 0.864 |
CHISP_0248 | CHISP_3346 | GTP-binding protein EngB. | 50S ribosomal protein L21p. | 0.847 |
CHISP_1324 | CHISP_0248 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | GTP-binding protein EngB. | 0.890 |
CHISP_1324 | CHISP_1385 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 50S ribosomal protein L13p (L13Ae). | 0.833 |
CHISP_1324 | CHISP_1622 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 50S ribosomal protein L11p (L12e). | 0.815 |
CHISP_1324 | CHISP_1632 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 50S ribosomal protein L3p (L3e). | 0.808 |
CHISP_1324 | CHISP_1643 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 50S ribosomal protein L24p (L26e). | 0.809 |
CHISP_1324 | CHISP_1651 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 50S ribosomal protein L15p (L27Ae). | 0.819 |
CHISP_1324 | CHISP_1658 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 50S ribosomal protein L17p. | 0.812 |
CHISP_1324 | CHISP_1877 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | RNA methyltransferase, TrmH family. | 0.795 |
CHISP_1324 | CHISP_2251 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | Iojap-like ribosome-associated protein. | 0.812 |
CHISP_1324 | CHISP_3346 | GTPase and tRNA-U34 5-formylation enzyme TrmE. | 50S ribosomal protein L21p. | 0.861 |
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