STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1878Beta-glucanase. (586 aa)    
Predicted Functional Partners:
CHISP_2683
Endoglucanase.
  
  
 0.827
CHISP_3352
beta-N-acetylhexosaminidase.
 
  
 0.814
CHISP_3068
Endoglucanase.
 
  
 0.745
CHISP_0803
beta-N-acetylhexosaminidase.
 
  
  0.720
CHISP_0626
Chitinase, GH18 family.
  
    0.713
CHISP_2935
Endo-1,4-beta-glucanase.
 
  
 0.683
CHISP_1879
Endo-1,3(4)-beta-glucanase.
 
   
 0.674
CHISP_2624
Endoglucanase.
 
  
 0.662
CHISP_0645
Endo-1,4-beta-glucanase.
 
     0.652
CHISP_1194
Endo-1,4-beta-glucanase.
 
  
 0.629
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.