Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0757 | CHISP_0760 | Flagellar assembly factor FliW. | Flagellar hook-associated protein FlgK. | 0.882 |
CHISP_0757 | CHISP_1861 | Flagellar assembly factor FliW. | Flagellar basal-body rod protein FlgB. | 0.789 |
CHISP_0757 | CHISP_1868 | Flagellar assembly factor FliW. | Flagellum-specific ATP synthase FliI. | 0.431 |
CHISP_0757 | CHISP_1923 | Flagellar assembly factor FliW. | Flagellin protein FlaA. | 0.817 |
CHISP_0757 | CHISP_2463 | Flagellar assembly factor FliW. | Flagellar motor switch protein FliN. | 0.851 |
CHISP_0757 | CHISP_2469 | Flagellar assembly factor FliW. | Flagellar hook protein FlgE. | 0.531 |
CHISP_0757 | CHISP_2472 | Flagellar assembly factor FliW. | Flagellar hook-length control protein FliK. | 0.506 |
CHISP_0757 | CHISP_3521 | Flagellar assembly factor FliW. | Flagellar biosynthesis protein FliS. | 0.919 |
CHISP_0757 | CHISP_3522 | Flagellar assembly factor FliW. | Flagellar hook-associated protein FliD. | 0.758 |
CHISP_0760 | CHISP_0757 | Flagellar hook-associated protein FlgK. | Flagellar assembly factor FliW. | 0.882 |
CHISP_0760 | CHISP_1861 | Flagellar hook-associated protein FlgK. | Flagellar basal-body rod protein FlgB. | 0.980 |
CHISP_0760 | CHISP_1868 | Flagellar hook-associated protein FlgK. | Flagellum-specific ATP synthase FliI. | 0.960 |
CHISP_0760 | CHISP_1923 | Flagellar hook-associated protein FlgK. | Flagellin protein FlaA. | 0.744 |
CHISP_0760 | CHISP_1945 | Flagellar hook-associated protein FlgK. | Flagellar L-ring protein FlgH. | 0.961 |
CHISP_0760 | CHISP_2463 | Flagellar hook-associated protein FlgK. | Flagellar motor switch protein FliN. | 0.999 |
CHISP_0760 | CHISP_2469 | Flagellar hook-associated protein FlgK. | Flagellar hook protein FlgE. | 0.986 |
CHISP_0760 | CHISP_2472 | Flagellar hook-associated protein FlgK. | Flagellar hook-length control protein FliK. | 0.944 |
CHISP_0760 | CHISP_3521 | Flagellar hook-associated protein FlgK. | Flagellar biosynthesis protein FliS. | 0.987 |
CHISP_0760 | CHISP_3522 | Flagellar hook-associated protein FlgK. | Flagellar hook-associated protein FliD. | 0.961 |
CHISP_1861 | CHISP_0757 | Flagellar basal-body rod protein FlgB. | Flagellar assembly factor FliW. | 0.789 |
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