STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1947Flagellar basal-body rod protein FlgG. (262 aa)    
Predicted Functional Partners:
CHISP_1944
Flagellar P-ring protein FlgI.
 
 0.999
CHISP_1862
Flagellar basal-body rod protein FlgC.
 
 0.997
CHISP_1945
Flagellar L-ring protein FlgH.
 
 
 0.997
CHISP_2463
Flagellar motor switch protein FliN.
 
 
 0.996
CHISP_1865
Flagellar M-ring protein FliF.
 
 
 0.989
CHISP_2469
Flagellar hook protein FlgE.
0.985
CHISP_2460
Flagellar biosynthesis protein FliQ.
 
 
 0.984
CHISP_2461
Flagellar biosynthesis protein FliP.
 
 
 0.979
CHISP_1864
Flagellar hook-basal body complex protein FliE.
 
 
 0.974
CHISP_1946
Flagellar basal-body P-ring formation protein FlgA.
 
  
 0.974
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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