Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0035 | CHISP_1996 | Inositol-1-phosphate synthase. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | 0.644 |
CHISP_0077 | CHISP_1393 | Hypothetical protein. | Phosphatidate cytidylyltransferase. | 0.634 |
CHISP_0077 | CHISP_1615 | Hypothetical protein. | ATP-dependent DNA helicase UvrD/PcrA. | 0.642 |
CHISP_0077 | CHISP_1768 | Hypothetical protein. | Phosphatidylglycerophosphatase A. | 0.670 |
CHISP_0077 | CHISP_1996 | Hypothetical protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | 0.668 |
CHISP_0642 | CHISP_1615 | Dual specificity protein phosphatase 23. | ATP-dependent DNA helicase UvrD/PcrA. | 0.556 |
CHISP_0642 | CHISP_1996 | Dual specificity protein phosphatase 23. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | 0.679 |
CHISP_1393 | CHISP_0077 | Phosphatidate cytidylyltransferase. | Hypothetical protein. | 0.634 |
CHISP_1393 | CHISP_1615 | Phosphatidate cytidylyltransferase. | ATP-dependent DNA helicase UvrD/PcrA. | 0.646 |
CHISP_1393 | CHISP_1996 | Phosphatidate cytidylyltransferase. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | 0.714 |
CHISP_1615 | CHISP_0077 | ATP-dependent DNA helicase UvrD/PcrA. | Hypothetical protein. | 0.642 |
CHISP_1615 | CHISP_0642 | ATP-dependent DNA helicase UvrD/PcrA. | Dual specificity protein phosphatase 23. | 0.556 |
CHISP_1615 | CHISP_1393 | ATP-dependent DNA helicase UvrD/PcrA. | Phosphatidate cytidylyltransferase. | 0.646 |
CHISP_1615 | CHISP_1996 | ATP-dependent DNA helicase UvrD/PcrA. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | 0.642 |
CHISP_1766 | CHISP_1768 | Damage-inducible protein CinA. | Phosphatidylglycerophosphatase A. | 0.811 |
CHISP_1766 | CHISP_1908 | Damage-inducible protein CinA. | Hypothetical protein. | 0.555 |
CHISP_1766 | CHISP_1909 | Damage-inducible protein CinA. | Hypothetical protein. | 0.555 |
CHISP_1766 | CHISP_1996 | Damage-inducible protein CinA. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | 0.906 |
CHISP_1766 | CHISP_2475 | Damage-inducible protein CinA. | Transcriptional regulator. | 0.555 |
CHISP_1768 | CHISP_0077 | Phosphatidylglycerophosphatase A. | Hypothetical protein. | 0.670 |
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