STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_2013Hypothetical protein. (267 aa)    
Predicted Functional Partners:
CHISP_2012
Uncharacterized protein (ATP-grasp superfamily).
       0.714
CHISP_0771
Hypothetical protein.
  
    0.626
CHISP_2014
Uncharacterized protein.
       0.558
CHISP_1227
ATPase AAA.
  
     0.457
CHISP_1057
Hypothetical protein.
 
     0.454
CHISP_1219
Hypothetical protein.
  
     0.451
CHISP_3009
Putative osmotically inducible protein Y.
 
    0.449
CHISP_1920
Hypothetical protein.
 
    0.430
CHISP_1780
Glycosyl transferase, group 1.
  
     0.426
CHISP_1220
Alkaline phosphatase.
  
     0.412
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.