STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_2017Hypothetical protein. (91 aa)    
Predicted Functional Partners:
CHISP_0272
Hypothetical protein.
   
 0.940
CHISP_2015
DNA recombination and repair protein RecO.
       0.797
CHISP_2016
Transporter.
       0.785
CHISP_2018
DNA protecting protein DprA.
       0.784
CHISP_0273
Cell division protein FtsA.
  
 
 0.700
CHISP_0274
Cell division protein FtsZ.
    
 0.689
CHISP_2291
Rare lipoprotein A.
   
 0.689
CHISP_2331
Cell division protein FtsK.
     
 0.645
CHISP_1338
Cell division transporter, ATP-binding protein FtsE.
   
 
 0.643
CHISP_0265
Cell division protein FtsI [Peptidoglycan synthetase].
  
 0.640
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.