STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_2097N-acetylglutamate synthase. (453 aa)    
Predicted Functional Partners:
CHISP_0788
Argininosuccinate synthase.
  
 
 0.995
CHISP_2765
Glutamate N-acetyltransferase.
 
 0.992
CHISP_0436
Argininosuccinate lyase.
  
 
 0.980
CHISP_0789
Acetylornithine aminotransferase.
 
 
 0.974
CHISP_2402
Ornithine carbamoyltransferase.
 
 
 0.974
CHISP_0791
N-acetyl-gamma-glutamyl-phosphate reductase.
 
 0.971
CHISP_1214
N-acetyl-gamma-glutamyl-phosphate reductase.
  
 0.953
CHISP_0418
Hypothetical protein.
   
 
 0.848
CHISP_1847
Peptidase M20.
  
 
 0.829
CHISP_2135
Carbamoyl-phosphate synthase large chain.
  
 
 0.821
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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