STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_2193Serine hydroxymethyltransferase. (504 aa)    
Predicted Functional Partners:
CHISP_0138
Phosphoribosylformylglycinamidine synthase, synthetase subunit.
  
 
 0.996
CHISP_1442
Glycine cleavage system aminomethyltransferase T.
 
 0.990
CHISP_0121
IMP cyclohydrolase.
  
 0.970
CHISP_2812
Ribose 5-phosphate isomerase.
 
 
  0.968
CHISP_1445
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein).
 
 
 0.953
CHISP_0734
Phosphoribosylamine--glycine ligase.
  
 0.950
CHISP_2181
Methylenetetrahydrofolate dehydrogenase (NADP+).
  
 0.950
CHISP_0062
Mov34/MPN/PAD-1 family protein.
   
  0.922
CHISP_1443
Glycine cleavage system H protein.
 
 
 0.915
CHISP_1148
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII.
  
 
 0.912
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.