Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0941 | CHISP_0942 | ABC transporter. | ABC transporter permease. | 0.982 |
CHISP_0941 | CHISP_0943 | ABC transporter. | ABC transporter, ATP-binding protein. | 0.933 |
CHISP_0941 | CHISP_2219 | ABC transporter. | Transcriptional regulator, PadR family. | 0.432 |
CHISP_0942 | CHISP_0941 | ABC transporter permease. | ABC transporter. | 0.982 |
CHISP_0942 | CHISP_0943 | ABC transporter permease. | ABC transporter, ATP-binding protein. | 0.969 |
CHISP_0942 | CHISP_2219 | ABC transporter permease. | Transcriptional regulator, PadR family. | 0.573 |
CHISP_0943 | CHISP_0941 | ABC transporter, ATP-binding protein. | ABC transporter. | 0.933 |
CHISP_0943 | CHISP_0942 | ABC transporter, ATP-binding protein. | ABC transporter permease. | 0.969 |
CHISP_0943 | CHISP_2218 | ABC transporter, ATP-binding protein. | ABC transporter ATP-binding protein. | 0.608 |
CHISP_0943 | CHISP_2219 | ABC transporter, ATP-binding protein. | Transcriptional regulator, PadR family. | 0.491 |
CHISP_2217 | CHISP_2218 | ABC transporter permease. | ABC transporter ATP-binding protein. | 0.645 |
CHISP_2217 | CHISP_2219 | ABC transporter permease. | Transcriptional regulator, PadR family. | 0.630 |
CHISP_2218 | CHISP_0943 | ABC transporter ATP-binding protein. | ABC transporter, ATP-binding protein. | 0.608 |
CHISP_2218 | CHISP_2217 | ABC transporter ATP-binding protein. | ABC transporter permease. | 0.645 |
CHISP_2218 | CHISP_2219 | ABC transporter ATP-binding protein. | Transcriptional regulator, PadR family. | 0.793 |
CHISP_2218 | CHISP_2220 | ABC transporter ATP-binding protein. | Aspartyl-tRNA synthetase. | 0.520 |
CHISP_2219 | CHISP_0941 | Transcriptional regulator, PadR family. | ABC transporter. | 0.432 |
CHISP_2219 | CHISP_0942 | Transcriptional regulator, PadR family. | ABC transporter permease. | 0.573 |
CHISP_2219 | CHISP_0943 | Transcriptional regulator, PadR family. | ABC transporter, ATP-binding protein. | 0.491 |
CHISP_2219 | CHISP_2217 | Transcriptional regulator, PadR family. | ABC transporter permease. | 0.630 |
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