Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0228 | CHISP_0624 | Arginyl-tRNA synthetase. | Methionyl-tRNA synthetase. | 0.982 |
CHISP_0228 | CHISP_1633 | Arginyl-tRNA synthetase. | 50S ribosomal protein L4p (L1e). | 0.705 |
CHISP_0228 | CHISP_1694 | Arginyl-tRNA synthetase. | Phenylalanyl-tRNA synthetase beta chain. | 0.896 |
CHISP_0228 | CHISP_2287 | Arginyl-tRNA synthetase. | Topoisomerase IV subunit A. | 0.605 |
CHISP_0228 | CHISP_2288 | Arginyl-tRNA synthetase. | Topoisomerase IV subunit B. | 0.556 |
CHISP_0235 | CHISP_2287 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | Topoisomerase IV subunit A. | 0.666 |
CHISP_0624 | CHISP_0228 | Methionyl-tRNA synthetase. | Arginyl-tRNA synthetase. | 0.982 |
CHISP_0624 | CHISP_1619 | Methionyl-tRNA synthetase. | Translation elongation factor Tu. | 0.423 |
CHISP_0624 | CHISP_1694 | Methionyl-tRNA synthetase. | Phenylalanyl-tRNA synthetase beta chain. | 0.967 |
CHISP_0624 | CHISP_2287 | Methionyl-tRNA synthetase. | Topoisomerase IV subunit A. | 0.764 |
CHISP_0624 | CHISP_2288 | Methionyl-tRNA synthetase. | Topoisomerase IV subunit B. | 0.457 |
CHISP_0624 | CHISP_2316 | Methionyl-tRNA synthetase. | DNA gyrase subunit B. | 0.457 |
CHISP_1619 | CHISP_0624 | Translation elongation factor Tu. | Methionyl-tRNA synthetase. | 0.423 |
CHISP_1619 | CHISP_1633 | Translation elongation factor Tu. | 50S ribosomal protein L4p (L1e). | 0.991 |
CHISP_1619 | CHISP_1694 | Translation elongation factor Tu. | Phenylalanyl-tRNA synthetase beta chain. | 0.524 |
CHISP_1619 | CHISP_2287 | Translation elongation factor Tu. | Topoisomerase IV subunit A. | 0.636 |
CHISP_1619 | CHISP_2357 | Translation elongation factor Tu. | Transcription termination protein NusA. | 0.690 |
CHISP_1633 | CHISP_0228 | 50S ribosomal protein L4p (L1e). | Arginyl-tRNA synthetase. | 0.705 |
CHISP_1633 | CHISP_1619 | 50S ribosomal protein L4p (L1e). | Translation elongation factor Tu. | 0.991 |
CHISP_1633 | CHISP_1694 | 50S ribosomal protein L4p (L1e). | Phenylalanyl-tRNA synthetase beta chain. | 0.938 |
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