STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_2338Rod shape-determining protein MreD. (166 aa)    
Predicted Functional Partners:
CHISP_2337
Rod shape-determining protein MreC.
 
     0.835
CHISP_2779
Hypothetical protein.
  
     0.659
CHISP_2339
Cell division protein FtsI [Peptidoglycan synthetase].
 
     0.653
CHISP_2780
Hypothetical protein.
  
     0.650
CHISP_2340
Rod shape-determining protein RodA.
 
     0.636
CHISP_0110
Hypothetical protein.
  
     0.548
CHISP_3344
Hypothetical protein.
  
     0.509
CHISP_2778
Hypothetical protein.
  
     0.498
CHISP_2336
Rod shape-determining protein MreB.
       0.494
CHISP_0028
Hypothetical protein.
  
     0.475
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.