STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_2551Sensor histidine kinase. (366 aa)    
Predicted Functional Partners:
CHISP_2521
Multi-sensor hybrid histidine kinase.
 
 0.959
CHISP_2148
Multi-sensor hybrid histidine kinase.
  
 0.952
CHISP_0099
Sensor histidine kinase AtoS.
 
0.942
CHISP_2497
Sensory box histidine kinase.
   
 0.935
CHISP_0673
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.932
CHISP_1267
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.930
CHISP_2534
Multi-sensor hybrid histidine kinase.
 
 
 0.928
CHISP_3650
Sensory box histidine kinase.
   
 0.920
CHISP_2799
Histidine kinase.
 
 
 0.915
CHISP_0011
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.913
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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