Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0002 | CHISP_0180 | Cellulase/endoglucanase. | N-acetylglucosamine-1-P-mutase. | 0.755 |
CHISP_0002 | CHISP_0181 | Cellulase/endoglucanase. | Multimodular transpeptidase-transglycosylase. | 0.744 |
CHISP_0002 | CHISP_0185 | Cellulase/endoglucanase. | Chitosanase/beta-glucanase. | 0.842 |
CHISP_0002 | CHISP_1832 | Cellulase/endoglucanase. | Chitosanase/endoglucanase. | 0.856 |
CHISP_0002 | CHISP_1980 | Cellulase/endoglucanase. | Glycoside hydrolase. | 0.858 |
CHISP_0002 | CHISP_2327 | Cellulase/endoglucanase. | Alginate lyase-like protein. | 0.861 |
CHISP_0002 | CHISP_2559 | Cellulase/endoglucanase. | Chitin deacetylase. | 0.856 |
CHISP_0002 | CHISP_2624 | Cellulase/endoglucanase. | Endoglucanase. | 0.857 |
CHISP_0002 | CHISP_3126 | Cellulase/endoglucanase. | Hypothetical protein. | 0.765 |
CHISP_0002 | CHISP_3278 | Cellulase/endoglucanase. | Uncharacterized protein. | 0.775 |
CHISP_0180 | CHISP_0002 | N-acetylglucosamine-1-P-mutase. | Cellulase/endoglucanase. | 0.755 |
CHISP_0180 | CHISP_0181 | N-acetylglucosamine-1-P-mutase. | Multimodular transpeptidase-transglycosylase. | 0.630 |
CHISP_0180 | CHISP_1832 | N-acetylglucosamine-1-P-mutase. | Chitosanase/endoglucanase. | 0.412 |
CHISP_0180 | CHISP_1980 | N-acetylglucosamine-1-P-mutase. | Glycoside hydrolase. | 0.647 |
CHISP_0180 | CHISP_2327 | N-acetylglucosamine-1-P-mutase. | Alginate lyase-like protein. | 0.439 |
CHISP_0180 | CHISP_2559 | N-acetylglucosamine-1-P-mutase. | Chitin deacetylase. | 0.725 |
CHISP_0180 | CHISP_2624 | N-acetylglucosamine-1-P-mutase. | Endoglucanase. | 0.504 |
CHISP_0180 | CHISP_3278 | N-acetylglucosamine-1-P-mutase. | Uncharacterized protein. | 0.744 |
CHISP_0181 | CHISP_0002 | Multimodular transpeptidase-transglycosylase. | Cellulase/endoglucanase. | 0.744 |
CHISP_0181 | CHISP_0180 | Multimodular transpeptidase-transglycosylase. | N-acetylglucosamine-1-P-mutase. | 0.630 |
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