Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0404 | CHISP_0900 | Ankyrin 1. | Putative ankyrin repeat protein. | 0.567 |
CHISP_0404 | CHISP_2043 | Ankyrin 1. | Ankyrin repeat protein. | 0.895 |
CHISP_0404 | CHISP_2582 | Ankyrin 1. | Membrane transport family protein permease. | 0.443 |
CHISP_0404 | CHISP_2651 | Ankyrin 1. | Ankyrin. | 0.775 |
CHISP_0404 | CHISP_2878 | Ankyrin 1. | NADP-dependent malic enzyme. | 0.484 |
CHISP_0550 | CHISP_2582 | Hypothetical protein. | Membrane transport family protein permease. | 0.464 |
CHISP_0550 | CHISP_2878 | Hypothetical protein. | NADP-dependent malic enzyme. | 0.484 |
CHISP_0900 | CHISP_0404 | Putative ankyrin repeat protein. | Ankyrin 1. | 0.567 |
CHISP_0900 | CHISP_2582 | Putative ankyrin repeat protein. | Membrane transport family protein permease. | 0.477 |
CHISP_0900 | CHISP_2651 | Putative ankyrin repeat protein. | Ankyrin. | 0.409 |
CHISP_0900 | CHISP_2878 | Putative ankyrin repeat protein. | NADP-dependent malic enzyme. | 0.496 |
CHISP_0900 | CHISP_2940 | Putative ankyrin repeat protein. | Ankyrin. | 0.405 |
CHISP_0900 | CHISP_2941 | Putative ankyrin repeat protein. | Hypothetical protein. | 0.454 |
CHISP_2042 | CHISP_2043 | Ankyrin repeat protein. | Ankyrin repeat protein. | 0.659 |
CHISP_2042 | CHISP_2582 | Ankyrin repeat protein. | Membrane transport family protein permease. | 0.443 |
CHISP_2042 | CHISP_2651 | Ankyrin repeat protein. | Ankyrin. | 0.775 |
CHISP_2042 | CHISP_2878 | Ankyrin repeat protein. | NADP-dependent malic enzyme. | 0.484 |
CHISP_2043 | CHISP_0404 | Ankyrin repeat protein. | Ankyrin 1. | 0.895 |
CHISP_2043 | CHISP_2042 | Ankyrin repeat protein. | Ankyrin repeat protein. | 0.659 |
CHISP_2043 | CHISP_2582 | Ankyrin repeat protein. | Membrane transport family protein permease. | 0.443 |
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