Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0643 | CHISP_1397 | Deoxyguanosinetriphosphate triphosphohydrolase. | Thioredoxin reductase. | 0.423 |
CHISP_0643 | CHISP_2057 | Deoxyguanosinetriphosphate triphosphohydrolase. | Deoxyguanosinetriphosphate triphosphohydrolase. | 0.700 |
CHISP_0643 | CHISP_2736 | Deoxyguanosinetriphosphate triphosphohydrolase. | Hypothetical protein. | 0.536 |
CHISP_0660 | CHISP_1397 | 2-dehydro-3-deoxygluconate kinase. | Thioredoxin reductase. | 0.620 |
CHISP_0660 | CHISP_2736 | 2-dehydro-3-deoxygluconate kinase. | Hypothetical protein. | 0.425 |
CHISP_0660 | CHISP_2737 | 2-dehydro-3-deoxygluconate kinase. | Trehalose synthase. | 0.581 |
CHISP_0874 | CHISP_1397 | Ribokinase. | Thioredoxin reductase. | 0.620 |
CHISP_0874 | CHISP_2736 | Ribokinase. | Hypothetical protein. | 0.425 |
CHISP_0874 | CHISP_2737 | Ribokinase. | Trehalose synthase. | 0.581 |
CHISP_1397 | CHISP_0643 | Thioredoxin reductase. | Deoxyguanosinetriphosphate triphosphohydrolase. | 0.423 |
CHISP_1397 | CHISP_0660 | Thioredoxin reductase. | 2-dehydro-3-deoxygluconate kinase. | 0.620 |
CHISP_1397 | CHISP_0874 | Thioredoxin reductase. | Ribokinase. | 0.620 |
CHISP_1397 | CHISP_2057 | Thioredoxin reductase. | Deoxyguanosinetriphosphate triphosphohydrolase. | 0.423 |
CHISP_1397 | CHISP_2736 | Thioredoxin reductase. | Hypothetical protein. | 0.690 |
CHISP_1907 | CHISP_2736 | Hypothetical protein. | Hypothetical protein. | 0.503 |
CHISP_2057 | CHISP_0643 | Deoxyguanosinetriphosphate triphosphohydrolase. | Deoxyguanosinetriphosphate triphosphohydrolase. | 0.700 |
CHISP_2057 | CHISP_1397 | Deoxyguanosinetriphosphate triphosphohydrolase. | Thioredoxin reductase. | 0.423 |
CHISP_2057 | CHISP_2736 | Deoxyguanosinetriphosphate triphosphohydrolase. | Hypothetical protein. | 0.536 |
CHISP_2735 | CHISP_2736 | Deoxyribodipyrimidine photolyase, type II. | Hypothetical protein. | 0.925 |
CHISP_2736 | CHISP_0643 | Hypothetical protein. | Deoxyguanosinetriphosphate triphosphohydrolase. | 0.536 |
page 1 of 2