Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0731 | CHISP_0785 | Glycogen synthase. | Trehalose synthase. | 0.942 |
CHISP_0731 | CHISP_0857 | Glycogen synthase. | Glycogen synthase. | 0.771 |
CHISP_0731 | CHISP_2737 | Glycogen synthase. | Trehalose synthase. | 0.942 |
CHISP_0731 | CHISP_2738 | Glycogen synthase. | 4-alpha-glucanotransferase (amylomaltase). | 0.642 |
CHISP_0731 | CHISP_2817 | Glycogen synthase. | Alpha-amylase. | 0.731 |
CHISP_0731 | CHISP_3325 | Glycogen synthase. | Malto-oligosyltrehalose synthase. | 0.538 |
CHISP_0731 | CHISP_3326 | Glycogen synthase. | Malto-oligosyltrehalose trehalohydrolase. | 0.858 |
CHISP_0731 | CHISP_3327 | Glycogen synthase. | Glycogen debranching enzyme. | 0.900 |
CHISP_0785 | CHISP_0731 | Trehalose synthase. | Glycogen synthase. | 0.942 |
CHISP_0785 | CHISP_0857 | Trehalose synthase. | Glycogen synthase. | 0.942 |
CHISP_0785 | CHISP_2006 | Trehalose synthase. | Glycogen synthase. | 0.942 |
CHISP_0785 | CHISP_2737 | Trehalose synthase. | Trehalose synthase. | 0.959 |
CHISP_0785 | CHISP_2738 | Trehalose synthase. | 4-alpha-glucanotransferase (amylomaltase). | 0.834 |
CHISP_0785 | CHISP_2817 | Trehalose synthase. | Alpha-amylase. | 0.939 |
CHISP_0785 | CHISP_3325 | Trehalose synthase. | Malto-oligosyltrehalose synthase. | 0.941 |
CHISP_0785 | CHISP_3326 | Trehalose synthase. | Malto-oligosyltrehalose trehalohydrolase. | 0.937 |
CHISP_0785 | CHISP_3327 | Trehalose synthase. | Glycogen debranching enzyme. | 0.970 |
CHISP_0785 | CHISP_3581 | Trehalose synthase. | Amino acid permease. | 0.940 |
CHISP_0857 | CHISP_0731 | Glycogen synthase. | Glycogen synthase. | 0.771 |
CHISP_0857 | CHISP_0785 | Glycogen synthase. | Trehalose synthase. | 0.942 |
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