Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_1190 | CHISP_1294 | Transketolase. | Shikimate 5-dehydrogenase. | 0.516 |
CHISP_1190 | CHISP_1900 | Transketolase. | Shikimate kinase I. | 0.507 |
CHISP_1190 | CHISP_1901 | Transketolase. | Chorismate synthase. | 0.484 |
CHISP_1190 | CHISP_2485 | Transketolase. | 3-deoxy-7-phosphoheptulonate synthase. | 0.699 |
CHISP_1190 | CHISP_2835 | Transketolase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.603 |
CHISP_1292 | CHISP_1294 | 3-dehydroquinate synthase. | Shikimate 5-dehydrogenase. | 0.996 |
CHISP_1292 | CHISP_1400 | 3-dehydroquinate synthase. | Prephenate dehydratase. | 0.743 |
CHISP_1292 | CHISP_1900 | 3-dehydroquinate synthase. | Shikimate kinase I. | 0.972 |
CHISP_1292 | CHISP_1901 | 3-dehydroquinate synthase. | Chorismate synthase. | 0.981 |
CHISP_1292 | CHISP_1979 | 3-dehydroquinate synthase. | Para-aminobenzoate synthase, aminase component. | 0.646 |
CHISP_1292 | CHISP_2175 | 3-dehydroquinate synthase. | Anthranilate synthase, amidotransferase component. | 0.515 |
CHISP_1292 | CHISP_2478 | 3-dehydroquinate synthase. | Histidinol-phosphate aminotransferase. | 0.644 |
CHISP_1292 | CHISP_2485 | 3-dehydroquinate synthase. | 3-deoxy-7-phosphoheptulonate synthase. | 0.981 |
CHISP_1292 | CHISP_2835 | 3-dehydroquinate synthase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.756 |
CHISP_1294 | CHISP_1190 | Shikimate 5-dehydrogenase. | Transketolase. | 0.516 |
CHISP_1294 | CHISP_1292 | Shikimate 5-dehydrogenase. | 3-dehydroquinate synthase. | 0.996 |
CHISP_1294 | CHISP_1400 | Shikimate 5-dehydrogenase. | Prephenate dehydratase. | 0.803 |
CHISP_1294 | CHISP_1900 | Shikimate 5-dehydrogenase. | Shikimate kinase I. | 0.971 |
CHISP_1294 | CHISP_1901 | Shikimate 5-dehydrogenase. | Chorismate synthase. | 0.981 |
CHISP_1294 | CHISP_1979 | Shikimate 5-dehydrogenase. | Para-aminobenzoate synthase, aminase component. | 0.844 |
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