Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0059 | CHISP_0350 | Thiamine biosynthesis protein ThiS. | Thiamine biosynthesis protein ThiC. | 0.835 |
CHISP_0059 | CHISP_2838 | Thiamine biosynthesis protein ThiS. | Thiamine biosynthesis protein ThiH. | 0.807 |
CHISP_0059 | CHISP_3372 | Thiamine biosynthesis protein ThiS. | Thiamine biosynthesis protein ThiG. | 0.987 |
CHISP_0350 | CHISP_0059 | Thiamine biosynthesis protein ThiC. | Thiamine biosynthesis protein ThiS. | 0.835 |
CHISP_0350 | CHISP_2838 | Thiamine biosynthesis protein ThiC. | Thiamine biosynthesis protein ThiH. | 0.853 |
CHISP_0350 | CHISP_3372 | Thiamine biosynthesis protein ThiC. | Thiamine biosynthesis protein ThiG. | 0.980 |
CHISP_1861 | CHISP_2521 | Flagellar basal-body rod protein FlgB. | Multi-sensor hybrid histidine kinase. | 0.815 |
CHISP_1861 | CHISP_2838 | Flagellar basal-body rod protein FlgB. | Thiamine biosynthesis protein ThiH. | 0.831 |
CHISP_1861 | CHISP_2847 | Flagellar basal-body rod protein FlgB. | Anti-sigma B factor RsbT. | 0.921 |
CHISP_2521 | CHISP_1861 | Multi-sensor hybrid histidine kinase. | Flagellar basal-body rod protein FlgB. | 0.815 |
CHISP_2521 | CHISP_2838 | Multi-sensor hybrid histidine kinase. | Thiamine biosynthesis protein ThiH. | 0.814 |
CHISP_2521 | CHISP_2847 | Multi-sensor hybrid histidine kinase. | Anti-sigma B factor RsbT. | 0.972 |
CHISP_2836 | CHISP_2838 | Fe-only hydrogenase maturation protein HydE. | Thiamine biosynthesis protein ThiH. | 0.828 |
CHISP_2836 | CHISP_2839 | Fe-only hydrogenase maturation protein HydE. | Fe-only hydrogenase maturation protein HydF. | 0.993 |
CHISP_2836 | CHISP_2840 | Fe-only hydrogenase maturation protein HydE. | Hypothetical protein. | 0.905 |
CHISP_2836 | CHISP_2841 | Fe-only hydrogenase maturation protein HydE. | Fe-only hydrogenase, catalytic subunit HydA. | 0.904 |
CHISP_2838 | CHISP_0059 | Thiamine biosynthesis protein ThiH. | Thiamine biosynthesis protein ThiS. | 0.807 |
CHISP_2838 | CHISP_0350 | Thiamine biosynthesis protein ThiH. | Thiamine biosynthesis protein ThiC. | 0.853 |
CHISP_2838 | CHISP_1861 | Thiamine biosynthesis protein ThiH. | Flagellar basal-body rod protein FlgB. | 0.831 |
CHISP_2838 | CHISP_2521 | Thiamine biosynthesis protein ThiH. | Multi-sensor hybrid histidine kinase. | 0.814 |
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