Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0608 | CHISP_0611 | Hypothetical protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | 0.946 |
CHISP_0608 | CHISP_0813 | Hypothetical protein. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase. | 0.896 |
CHISP_0608 | CHISP_1148 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII. | 0.880 |
CHISP_0608 | CHISP_1710 | Hypothetical protein. | Non-ribosomal peptide synthetase. | 0.988 |
CHISP_0608 | CHISP_1974 | Hypothetical protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.934 |
CHISP_0608 | CHISP_2894 | Hypothetical protein. | Beta-ketoacyl synthase. | 0.862 |
CHISP_0608 | CHISP_3687 | Hypothetical protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.934 |
CHISP_0611 | CHISP_0608 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | Hypothetical protein. | 0.946 |
CHISP_0611 | CHISP_0783 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | Acyl carrier protein. | 0.863 |
CHISP_0611 | CHISP_0813 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase. | 0.715 |
CHISP_0611 | CHISP_1148 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII. | 0.957 |
CHISP_0611 | CHISP_1710 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | Non-ribosomal peptide synthetase. | 0.906 |
CHISP_0611 | CHISP_1972 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | Acyl carrier protein. | 0.863 |
CHISP_0611 | CHISP_1974 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | Malonyl CoA-acyl carrier protein transacylase. | 0.954 |
CHISP_0611 | CHISP_2894 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | Beta-ketoacyl synthase. | 0.878 |
CHISP_0611 | CHISP_3255 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | Acyl carrier protein. | 0.863 |
CHISP_0611 | CHISP_3687 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | Malonyl CoA-acyl carrier protein transacylase. | 0.956 |
CHISP_0783 | CHISP_0611 | Acyl carrier protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form. | 0.863 |
CHISP_0783 | CHISP_0813 | Acyl carrier protein. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase. | 0.896 |
CHISP_0783 | CHISP_1148 | Acyl carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII. | 0.880 |
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