Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_3017 | CHISP_3018 | Sensory box histidine kinase. | Glucoamylase. | 0.605 |
CHISP_3017 | CHISP_3019 | Sensory box histidine kinase. | Hypothetical protein. | 0.613 |
CHISP_3017 | CHISP_3020 | Sensory box histidine kinase. | Hypothetical protein. | 0.605 |
CHISP_3017 | CHISP_3021 | Sensory box histidine kinase. | Hypothetical protein. | 0.589 |
CHISP_3017 | CHISP_3022 | Sensory box histidine kinase. | Oxidoreductase, FAD-binding. | 0.589 |
CHISP_3017 | CHISP_3023 | Sensory box histidine kinase. | Hypothetical protein. | 0.522 |
CHISP_3018 | CHISP_3017 | Glucoamylase. | Sensory box histidine kinase. | 0.605 |
CHISP_3018 | CHISP_3019 | Glucoamylase. | Hypothetical protein. | 0.800 |
CHISP_3018 | CHISP_3020 | Glucoamylase. | Hypothetical protein. | 0.773 |
CHISP_3018 | CHISP_3021 | Glucoamylase. | Hypothetical protein. | 0.752 |
CHISP_3018 | CHISP_3022 | Glucoamylase. | Oxidoreductase, FAD-binding. | 0.844 |
CHISP_3018 | CHISP_3023 | Glucoamylase. | Hypothetical protein. | 0.660 |
CHISP_3019 | CHISP_3017 | Hypothetical protein. | Sensory box histidine kinase. | 0.613 |
CHISP_3019 | CHISP_3018 | Hypothetical protein. | Glucoamylase. | 0.800 |
CHISP_3019 | CHISP_3020 | Hypothetical protein. | Hypothetical protein. | 0.773 |
CHISP_3019 | CHISP_3021 | Hypothetical protein. | Hypothetical protein. | 0.862 |
CHISP_3019 | CHISP_3022 | Hypothetical protein. | Oxidoreductase, FAD-binding. | 0.878 |
CHISP_3019 | CHISP_3023 | Hypothetical protein. | Hypothetical protein. | 0.784 |
CHISP_3020 | CHISP_3017 | Hypothetical protein. | Sensory box histidine kinase. | 0.605 |
CHISP_3020 | CHISP_3018 | Hypothetical protein. | Glucoamylase. | 0.773 |
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