STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_3141Protein of unknown function DUF342. (658 aa)    
Predicted Functional Partners:
CHISP_3142
Response regulator.
       0.781
CHISP_1861
Flagellar basal-body rod protein FlgB.
 
     0.734
CHISP_3140
Signal transduction histidine kinase CheA.
  
    0.662
CHISP_1867
Flagellar assembly protein FliH.
 
     0.643
CHISP_2464
Flagellar motor switch protein FliM.
 
     0.641
CHISP_2468
Flagellar protein FlbD.
 
   
 0.630
CHISP_0995
Chemotaxis protein CheX.
  
     0.621
CHISP_2456
Flagellar biosynthesis protein FlhF.
 
     0.605
CHISP_0692
Chemotaxis protein CheX.
  
     0.578
CHISP_0757
Flagellar assembly factor FliW.
 
     0.566
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.