STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_3265NADPH-dependent FMN reductase. (225 aa)    
Predicted Functional Partners:
CHISP_3019
Hypothetical protein.
  
 0.798
CHISP_2115
NADH:flavin oxidoreductase.
    
 0.665
CHISP_0729
CoA-disulfide reductase.
    
 0.663
CHISP_2881
Hypothetical protein.
    
 0.627
CHISP_0220
Succinate dehydrogenase flavoprotein subunit.
    
 0.626
CHISP_2362
Riboflavin kinase.
    
 0.624
CHISP_0063
Ferredoxin--sulfite reductase.
     
 0.600
CHISP_0987
Hydrolase (HAD superfamily).
    
  0.586
CHISP_1196
Metal-dependent hydrolase.
    
  0.585
CHISP_0980
Hypothetical protein.
  
 
 0.579
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.