STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_3299Phosphate transport system permease protein PstA. (286 aa)    
Predicted Functional Partners:
CHISP_3298
Phosphate transport ATP-binding protein PstB.
 
 0.999
CHISP_3300
Phosphate transport system permease protein PstC.
 
0.999
CHISP_3301
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS.
 
 
 0.997
CHISP_3297
Phosphate transport system regulatory protein PhoU.
  
 0.995
CHISP_1600
Pyruvate:ferredoxin oxidoreductase, delta subunit.
  
 
 0.937
CHISP_1180
ABC transporter substrate-binding protein.
    
 0.810
CHISP_0081
ABC transporter, ATP-binding protein.
  
 
 0.779
CHISP_0066
Sulfate adenylyltransferase subunit 1.
    
 0.760
CHISP_1183
Maltose/maltodextrin ABC transporter, permease protein MalF.
   
 
 0.759
CHISP_1185
Maltose/maltodextrin transport ATP-binding protein MalK.
   
 
 0.753
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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