Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0429 | CHISP_0453 | OmpA/MotB domain protein. | TPR-domain containing protein. | 0.727 |
CHISP_0429 | CHISP_1940 | OmpA/MotB domain protein. | Hypothetical protein. | 0.476 |
CHISP_0429 | CHISP_3343 | OmpA/MotB domain protein. | Protein kinase domain protein. | 0.657 |
CHISP_0429 | CHISP_3344 | OmpA/MotB domain protein. | Hypothetical protein. | 0.468 |
CHISP_0453 | CHISP_0429 | TPR-domain containing protein. | OmpA/MotB domain protein. | 0.727 |
CHISP_0453 | CHISP_1940 | TPR-domain containing protein. | Hypothetical protein. | 0.709 |
CHISP_0453 | CHISP_3343 | TPR-domain containing protein. | Protein kinase domain protein. | 0.705 |
CHISP_0453 | CHISP_3344 | TPR-domain containing protein. | Hypothetical protein. | 0.732 |
CHISP_1508 | CHISP_1886 | Hypothetical protein. | Hypothetical protein. | 0.478 |
CHISP_1508 | CHISP_2311 | Hypothetical protein. | Hypothetical protein. | 0.652 |
CHISP_1508 | CHISP_3343 | Hypothetical protein. | Protein kinase domain protein. | 0.652 |
CHISP_1886 | CHISP_1508 | Hypothetical protein. | Hypothetical protein. | 0.478 |
CHISP_1886 | CHISP_2311 | Hypothetical protein. | Hypothetical protein. | 0.541 |
CHISP_1886 | CHISP_3343 | Hypothetical protein. | Protein kinase domain protein. | 0.719 |
CHISP_1886 | CHISP_3344 | Hypothetical protein. | Hypothetical protein. | 0.428 |
CHISP_1886 | CHISP_3442 | Hypothetical protein. | Hypothetical protein. | 0.478 |
CHISP_1940 | CHISP_0429 | Hypothetical protein. | OmpA/MotB domain protein. | 0.476 |
CHISP_1940 | CHISP_0453 | Hypothetical protein. | TPR-domain containing protein. | 0.709 |
CHISP_1940 | CHISP_3343 | Hypothetical protein. | Protein kinase domain protein. | 0.708 |
CHISP_2311 | CHISP_1508 | Hypothetical protein. | Hypothetical protein. | 0.652 |
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