Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0047 | CHISP_3442 | Glucose-1-phosphate adenylyltransferase. | Hypothetical protein. | 0.799 |
CHISP_0090 | CHISP_2154 | FolM Alternative dihydrofolate reductase 1. | Endo-1,4-beta-glucanase. | 0.801 |
CHISP_0090 | CHISP_2762 | FolM Alternative dihydrofolate reductase 1. | Glucose 1-dehydrogenase. | 0.707 |
CHISP_0090 | CHISP_3442 | FolM Alternative dihydrofolate reductase 1. | Hypothetical protein. | 0.908 |
CHISP_0612 | CHISP_1973 | 3-oxoacyl-[acyl-carrier protein] reductase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.484 |
CHISP_0612 | CHISP_2154 | 3-oxoacyl-[acyl-carrier protein] reductase. | Endo-1,4-beta-glucanase. | 0.801 |
CHISP_0612 | CHISP_2271 | 3-oxoacyl-[acyl-carrier protein] reductase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.557 |
CHISP_0612 | CHISP_2762 | 3-oxoacyl-[acyl-carrier protein] reductase. | Glucose 1-dehydrogenase. | 0.520 |
CHISP_0612 | CHISP_3012 | 3-oxoacyl-[acyl-carrier protein] reductase. | Short-chain dehydrogenase. | 0.533 |
CHISP_0612 | CHISP_3442 | 3-oxoacyl-[acyl-carrier protein] reductase. | Hypothetical protein. | 0.908 |
CHISP_1973 | CHISP_0612 | 3-oxoacyl-[acyl-carrier protein] reductase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.484 |
CHISP_1973 | CHISP_2154 | 3-oxoacyl-[acyl-carrier protein] reductase. | Endo-1,4-beta-glucanase. | 0.801 |
CHISP_1973 | CHISP_3154 | 3-oxoacyl-[acyl-carrier protein] reductase. | Short chain dehydrogenase. | 0.519 |
CHISP_1973 | CHISP_3442 | 3-oxoacyl-[acyl-carrier protein] reductase. | Hypothetical protein. | 0.908 |
CHISP_2154 | CHISP_0090 | Endo-1,4-beta-glucanase. | FolM Alternative dihydrofolate reductase 1. | 0.801 |
CHISP_2154 | CHISP_0612 | Endo-1,4-beta-glucanase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.801 |
CHISP_2154 | CHISP_1973 | Endo-1,4-beta-glucanase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.801 |
CHISP_2154 | CHISP_2271 | Endo-1,4-beta-glucanase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.801 |
CHISP_2154 | CHISP_2762 | Endo-1,4-beta-glucanase. | Glucose 1-dehydrogenase. | 0.801 |
CHISP_2154 | CHISP_3012 | Endo-1,4-beta-glucanase. | Short-chain dehydrogenase. | 0.801 |
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