Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0198 | CHISP_0200 | Signal transduction histidine kinase CheA. | Chemotaxis response regulator protein-glutamate methylesterase CheB. | 0.997 |
CHISP_0198 | CHISP_1127 | Signal transduction histidine kinase CheA. | Chemotaxis response regulator protein-glutamate methylesterase CheB. | 0.995 |
CHISP_0198 | CHISP_1130 | Signal transduction histidine kinase CheA. | Signal transduction histidine kinase CheA. | 0.956 |
CHISP_0198 | CHISP_1598 | Signal transduction histidine kinase CheA. | Sensory box histidine kinase/response regulator. | 0.990 |
CHISP_0198 | CHISP_2801 | Signal transduction histidine kinase CheA. | Chemotaxis response regulator protein-glutamate methylesterase CheB. | 0.994 |
CHISP_0198 | CHISP_2802 | Signal transduction histidine kinase CheA. | Signal transduction histidine kinase CheA. | 0.963 |
CHISP_0198 | CHISP_2803 | Signal transduction histidine kinase CheA. | Type IV pilus biogenesis protein PilJ. | 0.990 |
CHISP_0198 | CHISP_2805 | Signal transduction histidine kinase CheA. | Chemotaxis protein methyltransferase CheR. | 0.886 |
CHISP_0198 | CHISP_3648 | Signal transduction histidine kinase CheA. | Chemotaxis protein CheR. | 0.961 |
CHISP_0198 | CHISP_3649 | Signal transduction histidine kinase CheA. | Chemotaxis protein CheW. | 0.986 |
CHISP_0200 | CHISP_0198 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Signal transduction histidine kinase CheA. | 0.997 |
CHISP_0200 | CHISP_1130 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Signal transduction histidine kinase CheA. | 0.995 |
CHISP_0200 | CHISP_1598 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Sensory box histidine kinase/response regulator. | 0.947 |
CHISP_0200 | CHISP_2802 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Signal transduction histidine kinase CheA. | 0.993 |
CHISP_0200 | CHISP_2803 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Type IV pilus biogenesis protein PilJ. | 0.883 |
CHISP_0200 | CHISP_2805 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Chemotaxis protein methyltransferase CheR. | 0.801 |
CHISP_0200 | CHISP_3648 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Chemotaxis protein CheR. | 0.949 |
CHISP_0200 | CHISP_3649 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Chemotaxis protein CheW. | 0.810 |
CHISP_1127 | CHISP_0198 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Signal transduction histidine kinase CheA. | 0.995 |
CHISP_1127 | CHISP_1130 | Chemotaxis response regulator protein-glutamate methylesterase CheB. | Signal transduction histidine kinase CheA. | 0.996 |
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