Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_1622 | CHISP_1626 | 50S ribosomal protein L11p (L12e). | DNA-directed RNA polymerase beta subunit. | 0.998 |
CHISP_1622 | CHISP_1627 | 50S ribosomal protein L11p (L12e). | DNA-directed RNA polymerase beta' subunit. | 0.996 |
CHISP_1622 | CHISP_1629 | 50S ribosomal protein L11p (L12e). | 30S ribosomal protein S7p (S5e). | 0.991 |
CHISP_1622 | CHISP_1631 | 50S ribosomal protein L11p (L12e). | 30S ribosomal protein S10p (S20e). | 0.991 |
CHISP_1622 | CHISP_1638 | 50S ribosomal protein L11p (L12e). | 30S ribosomal protein S3p (S3e). | 0.989 |
CHISP_1622 | CHISP_1646 | 50S ribosomal protein L11p (L12e). | 30S ribosomal protein S8p (S15Ae). | 0.992 |
CHISP_1622 | CHISP_1647 | 50S ribosomal protein L11p (L12e). | 50S ribosomal protein L6p (L9e). | 0.993 |
CHISP_1622 | CHISP_1657 | 50S ribosomal protein L11p (L12e). | DNA-directed RNA polymerase alpha subunit. | 0.989 |
CHISP_1622 | CHISP_2357 | 50S ribosomal protein L11p (L12e). | Transcription termination protein NusA. | 0.980 |
CHISP_1622 | CHISP_3659 | 50S ribosomal protein L11p (L12e). | Hypothetical protein. | 0.950 |
CHISP_1626 | CHISP_1622 | DNA-directed RNA polymerase beta subunit. | 50S ribosomal protein L11p (L12e). | 0.998 |
CHISP_1626 | CHISP_1627 | DNA-directed RNA polymerase beta subunit. | DNA-directed RNA polymerase beta' subunit. | 0.999 |
CHISP_1626 | CHISP_1629 | DNA-directed RNA polymerase beta subunit. | 30S ribosomal protein S7p (S5e). | 0.995 |
CHISP_1626 | CHISP_1631 | DNA-directed RNA polymerase beta subunit. | 30S ribosomal protein S10p (S20e). | 0.995 |
CHISP_1626 | CHISP_1638 | DNA-directed RNA polymerase beta subunit. | 30S ribosomal protein S3p (S3e). | 0.991 |
CHISP_1626 | CHISP_1646 | DNA-directed RNA polymerase beta subunit. | 30S ribosomal protein S8p (S15Ae). | 0.987 |
CHISP_1626 | CHISP_1647 | DNA-directed RNA polymerase beta subunit. | 50S ribosomal protein L6p (L9e). | 0.991 |
CHISP_1626 | CHISP_1657 | DNA-directed RNA polymerase beta subunit. | DNA-directed RNA polymerase alpha subunit. | 0.999 |
CHISP_1626 | CHISP_2357 | DNA-directed RNA polymerase beta subunit. | Transcription termination protein NusA. | 0.992 |
CHISP_1626 | CHISP_3659 | DNA-directed RNA polymerase beta subunit. | Hypothetical protein. | 0.982 |
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