STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_3673Protein of unknown function DUF285. (576 aa)    
Predicted Functional Partners:
CHISP_0397
Hypothetical protein.
  
 0.815
CHISP_0899
Fibro-slime family protein.
  
 0.815
CHISP_3488
Alkaline serine protease.
   
 0.768
CHISP_3705
Hypothetical protein.
   
 0.768
CHISP_0166
Cell surface protein.
  
 
  0.737
CHISP_0429
OmpA/MotB domain protein.
  
 
  0.735
CHISP_2154
Endo-1,4-beta-glucanase.
     
 0.728
CHISP_0555
Rhs family protein.
  
 0.707
CHISP_0557
Rhs family protein.
  
 0.707
CHISP_0560
Rhs family protein.
  
 0.707
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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