STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_3726LuxR family transcriptional regulator. (519 aa)    
Predicted Functional Partners:
CHISP_1132
Response regulatory protein.
 0.998
CHISP_3305
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 0.997
CHISP_0099
Sensor histidine kinase AtoS.
0.995
CHISP_2148
Multi-sensor hybrid histidine kinase.
 
0.991
CHISP_1598
Sensory box histidine kinase/response regulator.
0.990
CHISP_1447
Sensory box histidine kinase.
 
0.989
CHISP_0700
Metal dependent phosphohydrolase.
 0.987
CHISP_1516
Response regulator receiver:Transcriptional regulatory protein, C- terminal.
 
 0.987
CHISP_2799
Histidine kinase.
0.987
CHISP_2521
Multi-sensor hybrid histidine kinase.
 
0.986
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.