Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0397 | CHISP_0645 | Hypothetical protein. | Endo-1,4-beta-glucanase. | 0.408 |
CHISP_0397 | CHISP_3568 | Hypothetical protein. | Hypothetical protein. | 0.419 |
CHISP_0397 | CHISP_3729 | Hypothetical protein. | Hypothetical protein. | 0.493 |
CHISP_0645 | CHISP_0397 | Endo-1,4-beta-glucanase. | Hypothetical protein. | 0.408 |
CHISP_0645 | CHISP_0765 | Endo-1,4-beta-glucanase. | Chitinase, GH18 family. | 0.471 |
CHISP_0645 | CHISP_0899 | Endo-1,4-beta-glucanase. | Fibro-slime family protein. | 0.505 |
CHISP_0645 | CHISP_3729 | Endo-1,4-beta-glucanase. | Hypothetical protein. | 0.457 |
CHISP_0765 | CHISP_0645 | Chitinase, GH18 family. | Endo-1,4-beta-glucanase. | 0.471 |
CHISP_0765 | CHISP_3729 | Chitinase, GH18 family. | Hypothetical protein. | 0.410 |
CHISP_0899 | CHISP_0645 | Fibro-slime family protein. | Endo-1,4-beta-glucanase. | 0.505 |
CHISP_0899 | CHISP_3568 | Fibro-slime family protein. | Hypothetical protein. | 0.419 |
CHISP_0899 | CHISP_3729 | Fibro-slime family protein. | Hypothetical protein. | 0.493 |
CHISP_3568 | CHISP_0397 | Hypothetical protein. | Hypothetical protein. | 0.419 |
CHISP_3568 | CHISP_0899 | Hypothetical protein. | Fibro-slime family protein. | 0.419 |
CHISP_3568 | CHISP_3729 | Hypothetical protein. | Hypothetical protein. | 0.492 |
CHISP_3728 | CHISP_3729 | Hypothetical protein. | Hypothetical protein. | 0.610 |
CHISP_3729 | CHISP_0397 | Hypothetical protein. | Hypothetical protein. | 0.493 |
CHISP_3729 | CHISP_0645 | Hypothetical protein. | Endo-1,4-beta-glucanase. | 0.457 |
CHISP_3729 | CHISP_0765 | Hypothetical protein. | Chitinase, GH18 family. | 0.410 |
CHISP_3729 | CHISP_0899 | Hypothetical protein. | Fibro-slime family protein. | 0.493 |
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