STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GCQ9_9FIRMZinc-dependent protease. (426 aa)    
Predicted Functional Partners:
E7GFT8_9FIRM
Rieske domain-containing protein.
   
 0.996
E7GCQ8_9FIRM
Zinc-dependent protease.
 
  
 0.983
E7GC73_9FIRM
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.951
E7GCS0_9FIRM
NADH dehydrogenase.
  
 
 0.948
E7GCR2_9FIRM
NADH dehydrogenase.
   
 
 0.943
E7GB01_9FIRM
Amino acid adenylation domain-containing protein.
    
 0.914
E7GC44_9FIRM
Uncharacterized protein.
  
 
 0.902
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 
 0.897
E7GB02_9FIRM
Carrier domain-containing protein.
   
 
 0.880
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.880
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.