STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GDC0_9FIRMCupin domain-containing protein. (114 aa)    
Predicted Functional Partners:
E7GG92_9FIRM
Uncharacterized protein.
  
 0.862
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.854
E7G6I4_9FIRM
Uncharacterized protein.
    
 0.813
E7G9J5_9FIRM
Galactosyltransferase.
  
 
 0.804
GCA_000269565_03281
annotation not available
  
 
 0.804
E7G7D5_9FIRM
HTH araC/xylS-type domain-containing protein.
  
 0.790
E7G5H0_9FIRM
HTH araC/xylS-type domain-containing protein.
  
 0.790
E7G8H2_9FIRM
HTH araC/xylS-type domain-containing protein.
  
 0.790
E7G930_9FIRM
HTH araC/xylS-type domain-containing protein.
  
 0.790
E7G958_9FIRM
Homocysteine S-methyltransferase.
    
  0.773
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.