Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7G9M6_9FIRM | E7GAE1_9FIRM | GCA_000269565_03312 | GCA_000269565_03573 | Competence/damage inducible protein cinA. | Competence/damage inducible protein; Belongs to the CinA family. | 0.991 |
E7G9M6_9FIRM | E7GC73_9FIRM | GCA_000269565_03312 | GCA_000269565_00016 | Competence/damage inducible protein cinA. | Pyruvate-flavodoxin oxidoreductase. | 0.561 |
E7G9M6_9FIRM | E7GGC1_9FIRM | GCA_000269565_03312 | GCA_000269565_00560 | Competence/damage inducible protein cinA. | HTH cro/C1-type domain-containing protein. | 0.731 |
E7G9M6_9FIRM | nadE | GCA_000269565_03312 | GCA_000269565_01660 | Competence/damage inducible protein cinA. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.943 |
E7G9R0_9FIRM | E7GGC1_9FIRM | GCA_000269565_03345 | GCA_000269565_00560 | Transcriptional regulator. | HTH cro/C1-type domain-containing protein. | 0.785 |
E7GAE1_9FIRM | E7G9M6_9FIRM | GCA_000269565_03573 | GCA_000269565_03312 | Competence/damage inducible protein; Belongs to the CinA family. | Competence/damage inducible protein cinA. | 0.991 |
E7GAE1_9FIRM | E7GC73_9FIRM | GCA_000269565_03573 | GCA_000269565_00016 | Competence/damage inducible protein; Belongs to the CinA family. | Pyruvate-flavodoxin oxidoreductase. | 0.561 |
E7GAE1_9FIRM | E7GGC1_9FIRM | GCA_000269565_03573 | GCA_000269565_00560 | Competence/damage inducible protein; Belongs to the CinA family. | HTH cro/C1-type domain-containing protein. | 0.731 |
E7GAE1_9FIRM | nadE | GCA_000269565_03573 | GCA_000269565_01660 | Competence/damage inducible protein; Belongs to the CinA family. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.943 |
E7GC73_9FIRM | E7G9M6_9FIRM | GCA_000269565_00016 | GCA_000269565_03312 | Pyruvate-flavodoxin oxidoreductase. | Competence/damage inducible protein cinA. | 0.561 |
E7GC73_9FIRM | E7GAE1_9FIRM | GCA_000269565_00016 | GCA_000269565_03573 | Pyruvate-flavodoxin oxidoreductase. | Competence/damage inducible protein; Belongs to the CinA family. | 0.561 |
E7GC73_9FIRM | E7GGC1_9FIRM | GCA_000269565_00016 | GCA_000269565_00560 | Pyruvate-flavodoxin oxidoreductase. | HTH cro/C1-type domain-containing protein. | 0.749 |
E7GC73_9FIRM | nadE | GCA_000269565_00016 | GCA_000269565_01660 | Pyruvate-flavodoxin oxidoreductase. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.945 |
E7GE53_9FIRM | E7GGC1_9FIRM | GCA_000269565_02500 | GCA_000269565_00560 | Transcriptional regulator. | HTH cro/C1-type domain-containing protein. | 0.785 |
E7GGC1_9FIRM | E7G9M6_9FIRM | GCA_000269565_00560 | GCA_000269565_03312 | HTH cro/C1-type domain-containing protein. | Competence/damage inducible protein cinA. | 0.731 |
E7GGC1_9FIRM | E7G9R0_9FIRM | GCA_000269565_00560 | GCA_000269565_03345 | HTH cro/C1-type domain-containing protein. | Transcriptional regulator. | 0.785 |
E7GGC1_9FIRM | E7GAE1_9FIRM | GCA_000269565_00560 | GCA_000269565_03573 | HTH cro/C1-type domain-containing protein. | Competence/damage inducible protein; Belongs to the CinA family. | 0.731 |
E7GGC1_9FIRM | E7GC73_9FIRM | GCA_000269565_00560 | GCA_000269565_00016 | HTH cro/C1-type domain-containing protein. | Pyruvate-flavodoxin oxidoreductase. | 0.749 |
E7GGC1_9FIRM | E7GE53_9FIRM | GCA_000269565_00560 | GCA_000269565_02500 | HTH cro/C1-type domain-containing protein. | Transcriptional regulator. | 0.785 |
E7GGC1_9FIRM | E7GGC6_9FIRM | GCA_000269565_00560 | GCA_000269565_00559 | HTH cro/C1-type domain-containing protein. | Transcriptional regulator. | 0.785 |
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