STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GFF7_9FIRMTransport permease protein. (248 aa)    
Predicted Functional Partners:
E7GFF6_9FIRM
ABC-type MDR transport system.
 
 
 0.956
E7GFF8_9FIRM
ABC2_membrane domain-containing protein.
  
    0.785
E7G7K5_9FIRM
Transport permease protein.
    
  0.724
E7GA44_9FIRM
Uncharacterized protein.
  
     0.722
E7GB89_9FIRM
ABC transporter.
 
 
 0.691
E7G955_9FIRM
FtsX domain-containing protein.
 
  
 0.691
E7GC66_9FIRM
Antibiotic ABC transporter ATP-binding protein.
 
 
 0.689
E7GCE4_9FIRM
Gliding motility protein.
 
 
 0.680
E7G5S6_9FIRM
Uncharacterized protein.
 
  
 0.672
E7G5P7_9FIRM
ABC transporter.
 
 
 0.672
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.