STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GFD8_9FIRMUncharacterized protein. (290 aa)    
Predicted Functional Partners:
E7GFD7_9FIRM
Uncharacterized protein.
  
  
 0.804
E7GFD9_9FIRM
UPF0020 domain-containing protein.
       0.675
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
    
  0.672
E7G661_9FIRM
Homoserine dehydrogenase.
    
  0.671
E7G5L3_9FIRM
Threonine synthase.
    
  0.626
E7GFE0_9FIRM
GIY-YIG nuclease superfamily protein.
       0.577
E7GFE1_9FIRM
MerR family Transcriptional regulator.
       0.542
E7GCQ0_9FIRM
Uncharacterized protein.
   
    0.446
E7GFD6_9FIRM
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.443
E7GFD5_9FIRM
FeS assembly protein sufB.
       0.443
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.