Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7G609_9FIRM | E7G612_9FIRM | GCA_000269565_01503 | GCA_000269565_01500 | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | Glucose-inhibited division protein A. | 0.459 |
E7G609_9FIRM | E7G613_9FIRM | GCA_000269565_01503 | GCA_000269565_01499 | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | Citrate transporter. | 0.434 |
E7G609_9FIRM | E7G614_9FIRM | GCA_000269565_01503 | GCA_000269565_01498 | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | Hydantoinase/oxoprolinase. | 0.428 |
E7G609_9FIRM | E7G615_9FIRM | GCA_000269565_01503 | GCA_000269565_01497 | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | Uncharacterized protein. | 0.413 |
E7G609_9FIRM | E7G617_9FIRM | GCA_000269565_01503 | GCA_000269565_01495 | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | Sugar kinase. | 0.438 |
E7G609_9FIRM | mfd | GCA_000269565_01503 | GCA_000269565_01501 | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.778 |
E7G609_9FIRM | pth | GCA_000269565_01503 | GCA_000269565_01502 | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.786 |
E7G612_9FIRM | E7G609_9FIRM | GCA_000269565_01500 | GCA_000269565_01503 | Glucose-inhibited division protein A. | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | 0.459 |
E7G612_9FIRM | E7G613_9FIRM | GCA_000269565_01500 | GCA_000269565_01499 | Glucose-inhibited division protein A. | Citrate transporter. | 0.947 |
E7G612_9FIRM | E7G614_9FIRM | GCA_000269565_01500 | GCA_000269565_01498 | Glucose-inhibited division protein A. | Hydantoinase/oxoprolinase. | 0.931 |
E7G612_9FIRM | E7G615_9FIRM | GCA_000269565_01500 | GCA_000269565_01497 | Glucose-inhibited division protein A. | Uncharacterized protein. | 0.706 |
E7G612_9FIRM | E7G616_9FIRM | GCA_000269565_01500 | GCA_000269565_01496 | Glucose-inhibited division protein A. | FAD dependent oxidoreductase. | 0.966 |
E7G612_9FIRM | E7G617_9FIRM | GCA_000269565_01500 | GCA_000269565_01495 | Glucose-inhibited division protein A. | Sugar kinase. | 0.602 |
E7G612_9FIRM | E7G618_9FIRM | GCA_000269565_01500 | GCA_000269565_01494 | Glucose-inhibited division protein A. | Uncharacterized protein. | 0.429 |
E7G612_9FIRM | E7G6A9_9FIRM | GCA_000269565_01500 | GCA_000269565_01410 | Glucose-inhibited division protein A. | Uncharacterized protein. | 0.454 |
E7G612_9FIRM | mfd | GCA_000269565_01500 | GCA_000269565_01501 | Glucose-inhibited division protein A. | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.473 |
E7G612_9FIRM | pth | GCA_000269565_01500 | GCA_000269565_01502 | Glucose-inhibited division protein A. | Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.434 |
E7G613_9FIRM | E7G609_9FIRM | GCA_000269565_01499 | GCA_000269565_01503 | Citrate transporter. | Aamy domain-containing protein; Belongs to the glycosyl hydrolase 13 family. | 0.434 |
E7G613_9FIRM | E7G612_9FIRM | GCA_000269565_01499 | GCA_000269565_01500 | Citrate transporter. | Glucose-inhibited division protein A. | 0.947 |
E7G613_9FIRM | E7G614_9FIRM | GCA_000269565_01499 | GCA_000269565_01498 | Citrate transporter. | Hydantoinase/oxoprolinase. | 0.938 |
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