STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7G5P0_9FIRMBeta-galactosidase. (589 aa)    
Predicted Functional Partners:
E7G6E5_9FIRM
F5/8 type C domain-containing protein.
 
 0.995
E7G5N9_9FIRM
Unsaturated glucuronyl hydrolase.
 
 
 0.961
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
 
      0.885
E7G6U2_9FIRM
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.881
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
      0.874
E7GDU6_9FIRM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.865
E7G646_9FIRM
Uncharacterized protein.
 
 
 0.838
E7G8M8_9FIRM
Uncharacterized protein; Belongs to the glycosyl hydrolase 2 family.
 
 0.837
E7GGA7_9FIRM
Uncharacterized protein.
    
 0.780
carB
Carbamoyl-phosphate synthase large chain.
 
      0.765
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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