STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7G5N4_9FIRMGluconate 5-dehydrogenase. (269 aa)    
Predicted Functional Partners:
E7G5N3_9FIRM
Ribose 5-phosphate isomerase RpiB.
 
 
 0.980
E7GC73_9FIRM
Pyruvate-flavodoxin oxidoreductase.
   
 0.979
E7G8U4_9FIRM
Malonyl CoA-acyl carrier protein transacylase.
 
 0.945
E7G8U6_9FIRM
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.938
E7GDX4_9FIRM
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.889
E7G5N2_9FIRM
2-keto-3-deoxygluconate kinase.
 
 0.875
E7G8U7_9FIRM
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 0.874
E7G6U2_9FIRM
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.851
E7G5N9_9FIRM
Unsaturated glucuronyl hydrolase.
 
   
 0.848
E7G8P1_9FIRM
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.848
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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