STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GG90_9FIRMUncharacterized protein. (244 aa)    
Predicted Functional Partners:
E7GC25_9FIRM
Uncharacterized protein.
 
  
 0.859
E7G623_9FIRM
Uncharacterized protein.
 
 
 0.782
E7GG91_9FIRM
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
       0.771
E7G7L0_9FIRM
Ribulose-5-phosphate reductase; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate.
  
 
 0.725
E7G7U2_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.714
E7GCR2_9FIRM
NADH dehydrogenase.
    
 0.707
E7GFP7_9FIRM
Endo-1,4-beta-xylanase B.
 
 
 0.706
E7G6Y3_9FIRM
Alcohol dehydrogenase GroES domain-containing protein.
    
 0.702
E7G8H0_9FIRM
Uncharacterized protein.
    
 0.698
E7GDV7_9FIRM
Uncharacterized protein.
  
 
  0.689
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.