STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GG82_9FIRMPermease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (439 aa)    
Predicted Functional Partners:
E7GC19_9FIRM
Phosphotransferase system cellobiose-specific component IIA.
 
 
 0.930
E7GG89_9FIRM
Permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 
0.927
E7GDN9_9FIRM
PTS system lactose/cellobiose-specific IIA component protein.
 
 
 0.881
E7GDQ0_9FIRM
PTS system protein.
 
 
 0.867
E7G641_9FIRM
Beta-glucosides PTS.
 
 
 0.851
E7G8C7_9FIRM
Uncharacterized protein.
 
 
 0.806
E7GD20_9FIRM
PTS system cellobiose-specific phosphotransferase enzyme IIB component.
 
 
 0.792
E7G7F4_9FIRM
PTS system protein.
 
 
 0.791
E7G914_9FIRM
PTS system protein.
 
 
 0.782
E7G9U3_9FIRM
Uncharacterized protein.
  
 
 0.759
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.