STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GB19_9FIRMUncharacterized protein. (340 aa)    
Predicted Functional Partners:
E7G9A0_9FIRM
Uncharacterized protein.
 
     0.607
E7GBG7_9FIRM
Uncharacterized protein.
  
  
 0.571
E7G6T1_9FIRM
Penicillin-binding protein.
     
 0.567
E7GAD6_9FIRM
Uncharacterized protein.
     
 0.567
E7GB18_9FIRM
NLPC_P60 domain-containing protein.
     
 0.523
E7GCX4_9FIRM
Uncharacterized protein.
     
 0.508
E7GF07_9FIRM
Stage V sporulation protein D.
     
 0.508
E7GF08_9FIRM
Uncharacterized protein.
     
 0.508
E7GB20_9FIRM
DUF2179 domain-containing protein.
       0.471
E7GCN9_9FIRM
VanY domain-containing protein.
  
  
  0.457
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.