STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GDU6_9FIRMAldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (338 aa)    
Predicted Functional Partners:
E7GDU5_9FIRM
Galactokinase; Belongs to the GHMP kinase family.
 0.999
E7G6L5_9FIRM
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.976
galT
Galactose-1-phosphate uridylyltransferase.
 
  
 0.912
E7G7M5_9FIRM
Glucose kinase.
  
 
 0.888
E7G8M8_9FIRM
Uncharacterized protein; Belongs to the glycosyl hydrolase 2 family.
 
 0.885
E7G6U2_9FIRM
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.876
E7G5P0_9FIRM
Beta-galactosidase.
 
 
 0.865
E7G7R8_9FIRM
Uncharacterized protein.
  
 
 0.863
E7G7G4_9FIRM
PTS system protein.
  
 
 0.863
E7G6I2_9FIRM
PTS system protein.
  
 
 0.863
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.