Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7G6N3_9FIRM | E7G839_9FIRM | GCA_000269565_01290 | GCA_000269565_02772 | HD domain-containing protein. | Uncharacterized protein. | 0.905 |
E7G6T3_9FIRM | E7G839_9FIRM | GCA_000269565_01241 | GCA_000269565_02772 | Phospholipase D/transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily. | Uncharacterized protein. | 0.771 |
E7G814_9FIRM | E7G839_9FIRM | GCA_000269565_00799 | GCA_000269565_02772 | Transmembrane protein. | Uncharacterized protein. | 0.808 |
E7G814_9FIRM | E7GAS3_9FIRM | GCA_000269565_00799 | GCA_000269565_01959 | Transmembrane protein. | CoA-substrate-specific enzyme activase. | 0.477 |
E7G838_9FIRM | E7G839_9FIRM | GCA_000269565_02771 | GCA_000269565_02772 | Uncharacterized protein; Belongs to the 'phage' integrase family. | Uncharacterized protein. | 0.466 |
E7G838_9FIRM | E7G840_9FIRM | GCA_000269565_02771 | GCA_000269565_02773 | Uncharacterized protein; Belongs to the 'phage' integrase family. | Na+ driven multidrug efflux pump. | 0.452 |
E7G839_9FIRM | E7G6N3_9FIRM | GCA_000269565_02772 | GCA_000269565_01290 | Uncharacterized protein. | HD domain-containing protein. | 0.905 |
E7G839_9FIRM | E7G6T3_9FIRM | GCA_000269565_02772 | GCA_000269565_01241 | Uncharacterized protein. | Phospholipase D/transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily. | 0.771 |
E7G839_9FIRM | E7G814_9FIRM | GCA_000269565_02772 | GCA_000269565_00799 | Uncharacterized protein. | Transmembrane protein. | 0.808 |
E7G839_9FIRM | E7G838_9FIRM | GCA_000269565_02772 | GCA_000269565_02771 | Uncharacterized protein. | Uncharacterized protein; Belongs to the 'phage' integrase family. | 0.466 |
E7G839_9FIRM | E7G840_9FIRM | GCA_000269565_02772 | GCA_000269565_02773 | Uncharacterized protein. | Na+ driven multidrug efflux pump. | 0.746 |
E7G839_9FIRM | E7G841_9FIRM | GCA_000269565_02772 | GCA_000269565_02774 | Uncharacterized protein. | PTS_EIIC domain-containing protein. | 0.600 |
E7G839_9FIRM | E7GAS3_9FIRM | GCA_000269565_02772 | GCA_000269565_01959 | Uncharacterized protein. | CoA-substrate-specific enzyme activase. | 0.663 |
E7G839_9FIRM | murE-2 | GCA_000269565_02772 | GCA_000269565_02775 | Uncharacterized protein. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.456 |
E7G840_9FIRM | E7G838_9FIRM | GCA_000269565_02773 | GCA_000269565_02771 | Na+ driven multidrug efflux pump. | Uncharacterized protein; Belongs to the 'phage' integrase family. | 0.452 |
E7G840_9FIRM | E7G839_9FIRM | GCA_000269565_02773 | GCA_000269565_02772 | Na+ driven multidrug efflux pump. | Uncharacterized protein. | 0.746 |
E7G840_9FIRM | E7G841_9FIRM | GCA_000269565_02773 | GCA_000269565_02774 | Na+ driven multidrug efflux pump. | PTS_EIIC domain-containing protein. | 0.620 |
E7G840_9FIRM | murE-2 | GCA_000269565_02773 | GCA_000269565_02775 | Na+ driven multidrug efflux pump. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.470 |
E7G841_9FIRM | E7G839_9FIRM | GCA_000269565_02774 | GCA_000269565_02772 | PTS_EIIC domain-containing protein. | Uncharacterized protein. | 0.600 |
E7G841_9FIRM | E7G840_9FIRM | GCA_000269565_02774 | GCA_000269565_02773 | PTS_EIIC domain-containing protein. | Na+ driven multidrug efflux pump. | 0.620 |
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