STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7G8B2_9FIRMHTH cro/C1-type domain-containing protein. (154 aa)    
Predicted Functional Partners:
E7G8B3_9FIRM
Uncharacterized protein.
       0.773
E7GBC5_9FIRM
Transcriptional regulator.
 
   
 0.737
E7GB94_9FIRM
HTH cro/C1-type domain-containing protein.
 
   
 0.723
E7GB85_9FIRM
XRE family Transcriptional regulator.
 
   
 0.703
E7G969_9FIRM
HTH cro/C1-type domain-containing protein.
 
   
 0.630
E7G8B1_9FIRM
Uncharacterized protein.
       0.539
E7G8B5_9FIRM
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.508
E7G8B4_9FIRM
Alpha/beta hydrolase.
       0.476
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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