STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7G8H1_9FIRMUncharacterized protein. (74 aa)    
Predicted Functional Partners:
E7G8H2_9FIRM
HTH araC/xylS-type domain-containing protein.
       0.773
E7G8G7_9FIRM
Uncharacterized protein.
       0.588
E7G8G9_9FIRM
FMN_red domain-containing protein.
       0.588
E7G8H0_9FIRM
Uncharacterized protein.
       0.588
E7G8H3_9FIRM
Uncharacterized protein.
       0.505
E7G8H4_9FIRM
Uncharacterized protein.
       0.505
E7G8G5_9FIRM
Uncharacterized protein.
       0.400
E7G8G6_9FIRM
PadR-family transcriptional regulator.
       0.400
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.