Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7G8R1_9FIRM | E7G916_9FIRM | GCA_000269565_02992 | GCA_000269565_03095 | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | 0.712 |
E7G8R1_9FIRM | E7GAJ3_9FIRM | GCA_000269565_02992 | GCA_000269565_01878 | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | Uncharacterized protein. | 0.432 |
E7G8R1_9FIRM | E7GBQ4_9FIRM | GCA_000269565_02992 | GCA_000269565_02305 | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | Response regulator receiver modulated metal dependent phosphohydrolase. | 0.523 |
E7G8R1_9FIRM | E7GC77_9FIRM | GCA_000269565_02992 | GCA_000269565_00020 | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | Uncharacterized protein. | 0.553 |
E7G8R1_9FIRM | potA | GCA_000269565_02992 | GCA_000269565_00483 | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.577 |
E7G915_9FIRM | E7G916_9FIRM | GCA_000269565_03094 | GCA_000269565_03095 | Uncharacterized protein. | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | 0.420 |
E7G916_9FIRM | E7G8R1_9FIRM | GCA_000269565_03095 | GCA_000269565_02992 | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | 0.712 |
E7G916_9FIRM | E7G915_9FIRM | GCA_000269565_03095 | GCA_000269565_03094 | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | Uncharacterized protein. | 0.420 |
E7G916_9FIRM | E7G921_9FIRM | GCA_000269565_03095 | GCA_000269565_03100 | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | FabG protein. | 0.403 |
E7G916_9FIRM | E7GAJ3_9FIRM | GCA_000269565_03095 | GCA_000269565_01878 | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | Uncharacterized protein. | 0.432 |
E7G916_9FIRM | E7GBQ4_9FIRM | GCA_000269565_03095 | GCA_000269565_02305 | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | Response regulator receiver modulated metal dependent phosphohydrolase. | 0.523 |
E7G916_9FIRM | E7GC77_9FIRM | GCA_000269565_03095 | GCA_000269565_00020 | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | Uncharacterized protein. | 0.553 |
E7G916_9FIRM | E7GD42_9FIRM | GCA_000269565_03095 | GCA_000269565_00337 | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | Short chain dehydrogenase. | 0.401 |
E7G916_9FIRM | potA | GCA_000269565_03095 | GCA_000269565_00483 | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.577 |
E7G921_9FIRM | E7G916_9FIRM | GCA_000269565_03100 | GCA_000269565_03095 | FabG protein. | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | 0.403 |
E7GAJ3_9FIRM | E7G8R1_9FIRM | GCA_000269565_01878 | GCA_000269565_02992 | Uncharacterized protein. | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | 0.432 |
E7GAJ3_9FIRM | E7G916_9FIRM | GCA_000269565_01878 | GCA_000269565_03095 | Uncharacterized protein. | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | 0.432 |
E7GBQ4_9FIRM | E7G8R1_9FIRM | GCA_000269565_02305 | GCA_000269565_02992 | Response regulator receiver modulated metal dependent phosphohydrolase. | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | 0.523 |
E7GBQ4_9FIRM | E7G916_9FIRM | GCA_000269565_02305 | GCA_000269565_03095 | Response regulator receiver modulated metal dependent phosphohydrolase. | Transcription regulator; Belongs to the LysR transcriptional regulatory family. | 0.523 |
E7GC77_9FIRM | E7G8R1_9FIRM | GCA_000269565_00020 | GCA_000269565_02992 | Uncharacterized protein. | Transcriptional regulator MetR; Belongs to the LysR transcriptional regulatory family. | 0.553 |
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