STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7G9X0_9FIRMTranscriptional regulator. (202 aa)    
Predicted Functional Partners:
E7G9X3_9FIRM
ABC transporter permease.
 
   
 0.617
E7G9X2_9FIRM
ABC transporter.
   
 
 0.576
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.566
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.559
E7G616_9FIRM
FAD dependent oxidoreductase.
     
 0.542
E7GDX4_9FIRM
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.510
E7G8P1_9FIRM
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.507
E7G9X1_9FIRM
Uncharacterized protein.
       0.501
E7GAT7_9FIRM
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.469
E7GA46_9FIRM
Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
   
 
  0.465
Your Current Organism:
Coprobacillus cateniformis
NCBI taxonomy Id: 100884
Other names: C. cateniformis, CIP 106690, Coprobacillus catenaformis, Coprobacillus cateniformis corrig. Kageyama and Benno 2000, Coprobacillus sp. 29_1, Coprobacillus sp. D6, JCM 10604, strain RCA1-24
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