STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hibch3-hydroxyisobutyryl-CoA hydrolase, mitochondrial. (385 aa)    
Predicted Functional Partners:
Hibadh
3-hydroxyisobutyrate dehydrogenase, mitochondrial.
 
 
 0.998
Mrps5
28S ribosomal protein S5, mitochondrial.
    
 0.979
Mrps9
28S ribosomal protein S9, mitochondrial isoform X1.
   
 0.973
Dap3
28S ribosomal protein S29, mitochondrial.
   
 0.972
Mrps15
28S ribosomal protein S15, mitochondrial.
    
 0.971
Mrps35
28S ribosomal protein S35, mitochondrial isoform X1.
   
 0.968
Echs1
Enoyl-CoA hydratase, mitochondrial isoform X1.
  
0.967
Mrps16
28S ribosomal protein S16, mitochondrial.
   
 0.955
Mrps10
28S ribosomal protein S10, mitochondrial isoform X1.
    
 0.954
Mrps11
28S ribosomal protein S11, mitochondrial.
    
 0.954
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.